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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BLCA rs17009833 chr3:72532273 A/G 1.34E-5 216 3 11.58 8.88 KM Plot
BLCA rs17021302 chr4:147177773 A/G 2.23E-10 216 2.27 6.73 9.8 KM Plot
BLCA rs17025619 chr4:149935792 A/G 0 216 2.07 9.97 9.43 KM Plot
BLCA rs17060061 chr3:59031063 A/G 2.23E-11 216 3.6 10.43 9.27 KM Plot
BLCA rs17076348 chr13:32147675 A/T 0 216 9.47 9.25 2.07 KM Plot
BLCA rs17120281 chr8:14649851 A/G 0.000107 216 3.1 6.97 10.13 KM Plot
BLCA rs17138007 chr16:5572378 A/G 3.35E-6 216 4.07 10.7 9.27 KM Plot
BLCA rs17147073 chr4:70302440 A/G 1.19E-7 216 8.43 13.33 1.83 KM Plot
BLCA rs17365054 chr1:159808243 T/G 0.000165 206 8.43 13.67 5.77 KM Plot
BLCA rs17379984 chr18:5245824 G/A 1.61E-7 214 9.07 12.43 4.73 KM Plot
BLCA rs17557187 chr14:26473388 C/G 2.41E-5 216 2.47 11.07 9.27 KM Plot
BLCA rs17661357 chr1:150923099 A/G 7.9E-14 216 9.03 13.17 2.17 KM Plot
BLCA rs17674246 chr8:50732569 G/A 0 213 10.67 7.77 0.1 KM Plot
BLCA rs17674783 chr8:50757613 C/G 2.43E-5 216 10.53 9.03 1.92 KM Plot
BLCA rs17675074 chr8:50766065 C/T 1.37E-5 215 10.6 9.05 1.87 KM Plot